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Mr Jody Phelan

Assistant Professor

United Kingdom

Jump to: Affiliations Teaching Publications

Affiliations
Department of Infection Biology
Faculty of Infectious and Tropical Diseases

Centres

Antimicrobial Resistance Centre

Teaching
Help organise and teach on the Infectious Disease 'Omics short course at LSHTM and overseas. Teach on the pathogen genomics masters module.

Selected Publications
Mycobacterium tuberculosis whole genome sequencing provides insights into the Manila strain and drug-resistance mutations in the Philippines.
PHELAN, JE; Lim, DR; Mitarai, S; De Sessions, PF; Tujan, MA A; Reyes, LT; Medado, IA P; Palparan, AG; Naim, AN M; Jie, S; Segubre-Mercado, E; Simoes, B; CAMPINO, S; HAFALLA, JC; Murase, Y; Morishige, Y; HIBBERD, ML; Kato, S; Ama, MC G; CLARK, TG;
2019
Scientific reports
Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs.
PHELAN, JE; O'Sullivan, DM; Machado, D; Ramos, J; OPPONG, YE A; CAMPINO, S; O'Grady, J; McNerney, R; HIBBERD, ML; Viveiros, M; Huggett, JF; CLARK, TG;
2019
Genome medicine
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis.
COLL, F; PHELAN, J; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ali, S; Abdallah, AM; Alghamdi, S; Alsomali, M; Ahmed, AO; Portelli, S; OPPONG, Y; Alves, A; Bessa, TB; CAMPINO, S; Caws, M; Chatterjee, A; CRAMPIN, AC; DHEDA, K; FURNHAM, N; GLYNN, JR; Grandjean, L; Minh Ha, D; Hasan, R; Hasan, Z; ... CLARK, TG.
2018
Nature genetics
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs.
PHELAN, J; O'Sullivan, DM; Machado, D; Ramos, J; Whale, AS; O'Grady, J; DHEDA, K; CAMPINO, S; McNerney, R; Viveiros, M; Huggett, JF; CLARK, TG;
2016
Genome medicine
Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance.
PHELAN, J; COLL, F; McNerney, R; Ascher, DB; Pires, DE V; FURNHAM, N; Coeck, N; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ramsay, A; CAMPINO, S; HIBBERD, ML; Pain, A; Rigouts, L; CLARK, TG;
2016
BMC medicine
Convergent evolution of artemisinin and chloroquine resistance in Ethiopian Plasmodium falciparum parasites
Letebo, A; VANHEER, LN; Engdaw, M; Alemayehu, DH; Deressa, JD; Adnew, B; Ayele, A; Keffale, M; Demisse, M; Seyoum, T; Shiferaw, M; Sime, H; Gebreegziabxier, A; Shimelash, A; Tafa, EB; Chali, W; Alemayehu, L; Kassa, FA; Zeleke, AJ; Hamza, TA; Tamirat, AB; Misganaw, T; Bogale, A; Abriham, ZY; Nasir, Y; ... TADESSE, FG.
2025
Dryad
PPE50 variants as novel phylogeographic signatures of host-pathogen co-evolution in tuberculosis
D’Souza, C; PHELAN, JE; Gomez-Gonzalez, P-J; Thorpe, J; CLARK, TG; Tsolaki, AG;
2025
Communications biology
Rapid detection of antibiotic resistance in Burkholderia pseudomallei using MALDI-TOF mass spectrometry
Nithimongkolchai, N; Hinwan, Y; Trisakul, K; Wonglakorn, L; Chetchotisakd, P; Sirichoat, A; Nithichanon, A; Chareonsudjai, S; Chareonsudjai, P; PHELAN, J; CLARK, TG; Faksri, K;
2025
Scientific reports
Complete and draft genome sequences of clinical
<i>Mycobacterium tuberculosis</i>
isolates from the Philippines
Rojas, SM; Tujan, MA A; Valencia, AK C; Capin, JB G; Dizon, TJ R; Ama, MC G; Basilio, RP; Lim, DR; Reyes, LT; PHELAN, J; CAMPINO, S; CLARK, TG; De Los Reyes, MR A;
2025
Microbiology resource announcements
Whole-genome sequencing analysis of Burkholderia pseudomallei comparing drug-resistant and pan-susceptible isolates reveals novel biomarkers for drug resistance
Hinwan, Y; Nithimongkolchai, N; Trisakul, K; Kaewseekhao, B; Wonglakorn, L; Chetchotisakd, P; Chareonsudjai, S; Sirichoat, A; Nithichanon, A; PHELAN, J; CLARK, TG; Faksri, K;
2025
Infection, genetics and evolution
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Jody Phelan

Contact

United Kingdom